dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00235
Location and strand information: 2778 - 4250 (-)
Family: 2.A.2.2.3
Protein type: TC
Protein description: Lactose permease

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00236
Location and strand information: 4563 - 7745 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.1953
Protein molecular weight: 118679.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00237
Location and strand information: 7776 - 8798 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator LacR

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00238
Location and strand information: 8852 - 9733 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00239
Location and strand information: 9795 - 12341 (-)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0213
Protein molecular weight: 94647.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00240
Location and strand information: 12338 - 13003 (-)
Family: 9.B.28.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00241
Location and strand information: 13085 - 14041 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00242
Location and strand information: 14148 - 15170 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00243
Location and strand information: 15339 - 17195 (-)
Family: GH13_31|GH13
Protein type: CAZyme
Protein description: Oligo-1,6-glucosidase
Protein isoelectric point: 4.5906
Protein molecular weight: 69928.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002940_8|CGC1
Gene ID: MGYG000002940_00244
Location and strand information: 17477 - 19114 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002940_00235	Lactose permease	TC	2778	4250	-	2.A.2.2.3
MGYG000002940_00236	Beta-galactosidase	CAZyme	4563	7745	+	GH2
MGYG000002940_00237	HTH-type transcriptional regulator LacR	TF	7776	8798	-	LacI
MGYG000002940_00238	hypothetical protein	null	8852	9733	-	DUF1524
MGYG000002940_00239	hypothetical protein	CAZyme	9795	12341	-	GH31
MGYG000002940_00240	hypothetical protein	TC	12338	13003	-	9.B.28.1.10
MGYG000002940_00241	Lactose transport system permease protein LacG	TC	13085	14041	-	3.A.1.1.29
MGYG000002940_00242	putative multiple-sugar transport system permease YteP	TC	14148	15170	-	3.A.1.1.10
MGYG000002940_00243	Oligo-1,6-glucosidase	CAZyme	15339	17195	-	GH13_31\| GH13
MGYG000002940_00244	hypothetical protein	TC	17477	19114	-	3.A.1.1.10
Protein ID	Protein Name	Type	Start	End	Strand	Signature